Detection of obstructive coronary artery disease using a deep learning and machine learning ensemble: a retrospective feasibility study

Early identification of obstructive coronary artery disease (ObCAD) is crucial because it is strongly associated with acute myocardial infarction. We developed a weighted average ensemble model integrating deep learning (DL) and machine learning (ML) to leverage imaging and clinical data for enhancing the detection of ObCAD.

A retrospective cohort of 1054 patients was used to develop an ensemble model combining a 3D Vision Transformer with eXtreme Gradient Boosting and CatBoost for binary classification of ObCAD (>50% stenosis). Unstructured data comprised 3D cardiac non-contrast computed tomography (CT) scans, while structured data included 11 demographic and clinical features. Obstructive coronary artery disease labels were derived from corresponding coronary CT angiography. Model performance was evaluated using 10-fold cross-validation with fold-wise Wilcoxon signed-rank testing. The ensemble model achieved a mean receiver operating characteristic area under the curve (ROC AUC) of 0.81 ± 0.04 and an accuracy of 0.76 ± 0.04. It demonstrated a statistically significantly higher ROC AUC than individual component models. Feature importance analysis identified age, chest pain, and sex as the most influential predictors of ObCAD. Gradient-weighted class activation mapping visualization indicated that the 3D Vision Transformer primarily focused on cardiac regions containing coronary artery calcium deposits.

Integrating DL-based imaging analysis with ML-based clinical modelling enhances the discriminative performance for ObCAD detection with complementary interpretability. This ensemble framework demonstrates potential to support clinical decision-making by identifying high-risk patients using routine cardiac CT combined with patient-level clinical data. Future studies using external validation and coronary artery calcium scores may further improve risk prediction.